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PDBsum entry 6zfs
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Pore analysis for: 6zfs calculated with  MOLE 2.0
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PDB id
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6zfs
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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18 pores,
coloured by radius |
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20 pores,
coloured by radius
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20 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.30 |
2.30 |
36.8 |
-1.64 |
0.04 |
25.1 |
80 |
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5 |
3 |
1 |
7 |
3 |
0 |
0 |
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PEE 204 E
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2 |
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1.52 |
1.62 |
37.0 |
-1.63 |
-0.52 |
19.9 |
84 |
4 |
3 |
4 |
3 |
0 |
2 |
0 |
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3 |
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2.65 |
4.35 |
37.9 |
-1.76 |
-0.14 |
19.1 |
76 |
4 |
4 |
3 |
1 |
2 |
5 |
0 |
HEC 501 D CDL 101 G
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4 |
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1.26 |
1.30 |
43.7 |
-1.06 |
-0.21 |
15.3 |
80 |
7 |
1 |
6 |
6 |
3 |
0 |
0 |
CDL 405 C JGW 407 C CDL 503 D
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5 |
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1.52 |
1.61 |
48.4 |
-1.18 |
-0.45 |
16.7 |
85 |
4 |
4 |
7 |
5 |
0 |
3 |
0 |
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6 |
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2.97 |
5.44 |
51.2 |
0.53 |
0.93 |
5.6 |
66 |
3 |
0 |
3 |
7 |
9 |
0 |
1 |
CDL 405 C PEE 406 C CDL 101 G
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7 |
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1.22 |
1.30 |
53.1 |
-0.39 |
0.05 |
8.2 |
72 |
4 |
0 |
5 |
6 |
5 |
0 |
1 |
CDL 405 C PEE 406 C CDL 503 D PO4 104 G
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8 |
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1.29 |
2.30 |
55.6 |
-1.03 |
-0.16 |
23.0 |
77 |
8 |
3 |
2 |
6 |
2 |
0 |
0 |
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9 |
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2.04 |
2.12 |
63.0 |
-1.17 |
-0.26 |
12.3 |
88 |
6 |
2 |
11 |
5 |
2 |
2 |
0 |
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10 |
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1.29 |
1.42 |
67.7 |
1.04 |
0.71 |
6.5 |
71 |
5 |
0 |
2 |
19 |
6 |
0 |
0 |
HEM 402 C CDL 405 C PEE 406 C JGW 407 C CDL 101 G
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11 |
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1.57 |
1.71 |
74.6 |
-1.32 |
-0.23 |
19.7 |
79 |
6 |
5 |
8 |
8 |
4 |
4 |
0 |
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12 |
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1.54 |
1.66 |
83.3 |
-1.38 |
-0.38 |
16.4 |
85 |
10 |
4 |
9 |
6 |
2 |
2 |
0 |
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13 |
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1.52 |
1.65 |
84.2 |
-1.24 |
-0.24 |
18.5 |
79 |
6 |
5 |
9 |
10 |
4 |
5 |
0 |
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14 |
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1.67 |
1.69 |
85.6 |
-1.34 |
-0.26 |
19.4 |
82 |
7 |
4 |
10 |
8 |
4 |
3 |
0 |
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15 |
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1.66 |
2.39 |
93.3 |
-0.97 |
-0.08 |
18.3 |
85 |
9 |
5 |
5 |
13 |
3 |
0 |
0 |
PEE 204 E
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16 |
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1.50 |
1.66 |
94.0 |
-1.36 |
-0.35 |
20.8 |
81 |
9 |
7 |
7 |
10 |
3 |
4 |
0 |
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17 |
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1.25 |
1.25 |
96.7 |
-1.59 |
-0.65 |
21.8 |
78 |
5 |
8 |
5 |
2 |
3 |
2 |
0 |
CDL 101 G
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18 |
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1.72 |
1.82 |
99.6 |
-1.13 |
-0.15 |
16.8 |
79 |
9 |
6 |
10 |
11 |
7 |
5 |
0 |
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19 |
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1.29 |
1.29 |
110.1 |
-1.24 |
-0.55 |
14.3 |
78 |
2 |
10 |
6 |
3 |
2 |
6 |
0 |
HEC 501 D
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20 |
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1.18 |
1.18 |
118.4 |
-0.86 |
-0.53 |
12.0 |
79 |
2 |
8 |
6 |
5 |
2 |
5 |
1 |
HEC 501 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program