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PDBsum entry 6yac
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Pore analysis for: 6yac calculated with  MOLE 2.0
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PDB id
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6yac
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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15 pores,
coloured by radius |
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31 pores,
coloured by radius
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31 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.77 |
4.53 |
55.9 |
1.06 |
0.77 |
9.2 |
74 |
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5 |
0 |
2 |
10 |
7 |
1 |
0 |
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BCR 4011 A CLA 1222 B CLA 1223 B CLA 1228 B CLA
1229 B CLA 1230 B CLA 1231 B CLA 1234 B CLA 1235
B CLA 1236 B CLA 1240 B CLA 1301 F CLA 1302 F BCR
4014 F BCR 4016 F BCR 4012 J DGD 5001 J
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2 |
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2.69 |
4.47 |
62.8 |
0.78 |
0.78 |
11.6 |
70 |
3 |
0 |
2 |
11 |
10 |
0 |
0 |
CLA 1202 B CLA 1208 B CLA 1210 B CLA 1211 B CLA
1212 B CLA 1214 B CLA 1215 B CLA 1223 B CLA 1225
B CLA 1231 B BCR 4004 B BCR 4005 B BCR 4006 B
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3 |
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1.16 |
1.18 |
69.7 |
-1.41 |
-0.40 |
17.6 |
79 |
5 |
5 |
3 |
4 |
2 |
1 |
0 |
LHG 807 2 DGD 5005 F
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4 |
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2.25 |
3.32 |
70.9 |
0.12 |
0.40 |
12.5 |
75 |
5 |
2 |
5 |
11 |
9 |
0 |
0 |
CLA 1202 B CLA 1203 B CLA 1210 B CLA 1211 B CLA
1215 B CLA 1225 B CLA 1226 B BCR 4005 B BCR 4006
B DGD 5005 B
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5 |
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1.26 |
1.42 |
71.6 |
-1.25 |
0.03 |
14.6 |
74 |
6 |
4 |
4 |
4 |
6 |
2 |
0 |
CLA 1131 A BCR 4017 A CLA 1237 B CLA 1238 B CLA
1239 B PQN 2002 B DGD 5005 B BCR 4019 L
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6 |
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3.42 |
3.50 |
78.6 |
1.44 |
0.71 |
7.3 |
71 |
6 |
0 |
2 |
16 |
6 |
0 |
0 |
CLA 610 3 DGD 803 3 CLA 1103 A CLA 1104 A CLA
1111 A CLA 1112 A CLA 1113 A CLA 1114 A CLA 1117
A CLA 1127 A CLA 1128 A BCR 4002 A BCR 4003 A BCR
4001 K
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7 |
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1.66 |
4.26 |
78.7 |
1.39 |
0.84 |
6.3 |
68 |
4 |
0 |
1 |
8 |
9 |
0 |
0 |
CLA 1012 A CLA 1013 A CLA 1101 A CLA 1102 A CLA
1104 A CLA 1126 A CLA 1128 A CLA 1138 A CLA 1139
A CLA 1140 A PQN 2001 A BCR 4011 A LHG 5002 A CLA
1229 B CLA 1230 B CLA 1235 B CLA 1301 F BCR 4014
F BCR 4012 J DGD 5001 J
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8 |
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1.96 |
2.73 |
79.3 |
-1.72 |
-0.61 |
13.4 |
90 |
7 |
3 |
9 |
4 |
2 |
1 |
0 |
LHG 5002 A
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9 |
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1.67 |
4.26 |
80.7 |
1.36 |
0.74 |
5.0 |
72 |
5 |
0 |
2 |
13 |
8 |
1 |
0 |
CLA 1012 A CLA 1013 A CLA 1101 A CLA 1102 A CLA
1104 A CLA 1126 A CLA 1128 A CLA 1138 A CLA 1139
A CLA 1140 A PQN 2001 A BCR 4011 A LHG 5002 A CLA
1229 B CLA 1230 B CLA 1301 F BCR 4014 F BCR 4012
J DGD 5001 J
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10 |
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2.73 |
3.22 |
82.8 |
0.55 |
0.86 |
9.8 |
74 |
4 |
0 |
5 |
11 |
10 |
1 |
0 |
CLA 1202 B CLA 1203 B CLA 1204 B CLA 1205 B CLA
1206 B CLA 1208 B CLA 1210 B CLA 1211 B CLA 1212
B CLA 1215 B CLA 1224 B CLA 1225 B CLA 1226 B BCR
4004 B BCR 4005 B BCR 4006 B DGD 5005 B BCR 4018 I
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11 |
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1.67 |
2.52 |
88.1 |
0.17 |
0.82 |
14.1 |
76 |
7 |
0 |
6 |
13 |
10 |
1 |
0 |
CLA 1202 B CLA 1203 B CLA 1204 B CLA 1205 B CLA
1206 B CLA 1210 B CLA 1214 B CLA 1215 B CLA 1223
B CLA 1224 B CLA 1225 B CLA 1226 B CLA 1231 B BCR
4005 B DGD 5005 B BCR 4018 I
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12 |
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2.25 |
3.69 |
92.9 |
-0.41 |
0.35 |
15.1 |
79 |
7 |
2 |
7 |
11 |
9 |
0 |
0 |
CLA 1202 B CLA 1203 B CLA 1204 B CLA 1205 B CLA
1206 B CLA 1224 B CLA 1225 B CLA 1226 B BCR 4005
B DGD 5005 B BCR 4018 I
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13 |
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1.37 |
1.95 |
100.3 |
0.16 |
0.22 |
9.6 |
74 |
5 |
1 |
3 |
9 |
8 |
2 |
0 |
CLA 1012 A CLA 1013 A CLA 1101 A CLA 1126 A CLA
1138 A CLA 1139 A CLA 1140 A PQN 2001 A BCR 4011
A CLA 1229 B CLA 1230 B CLA 1235 B CLA 1301 F BCR
4014 F BCR 4012 J DGD 5001 J
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14 |
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1.31 |
1.95 |
102.2 |
0.39 |
0.28 |
8.2 |
76 |
6 |
1 |
4 |
14 |
7 |
3 |
0 |
CLA 1012 A CLA 1013 A CLA 1101 A CLA 1126 A CLA
1138 A CLA 1139 A CLA 1140 A PQN 2001 A BCR 4011
A CLA 1229 B CLA 1230 B CLA 1301 F BCR 4014 F BCR
4012 J DGD 5001 J
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15 |
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1.33 |
1.45 |
107.0 |
0.64 |
0.71 |
11.2 |
75 |
7 |
3 |
0 |
14 |
9 |
1 |
0 |
CLA 1131 A CLA 1132 A BCR 4017 A CLA 1022 B CLA
1023 B CLA 1206 B CLA 1207 B CLA 1237 B CLA 1238
B CLA 1239 B PQN 2002 B BCR 4018 I BCR 4020 I BCR
4019 L
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16 |
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1.48 |
1.55 |
110.4 |
-1.36 |
-0.39 |
15.8 |
82 |
8 |
6 |
9 |
8 |
5 |
2 |
0 |
LHG 807 2 CLA 1128 A LHG 5002 A DGD 5005 F
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17 |
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1.41 |
1.39 |
111.2 |
0.06 |
-0.15 |
8.5 |
72 |
3 |
5 |
4 |
11 |
5 |
3 |
0 |
LUT 502 3 CHL 604 3 CLA 605 3 CHL 611 3 CLA 1110 A
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18 |
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3.11 |
4.89 |
114.9 |
1.27 |
0.75 |
10.8 |
67 |
7 |
0 |
1 |
16 |
11 |
1 |
0 |
LUT 502 3 CHL 604 3 CLA 605 3 DGD 803 3 CLA 1103
A CLA 1108 A CLA 1110 A CLA 1111 A CLA 1112 A CLA
1113 A CLA 1114 A CLA 1118 A BCR 4002 A BCR 4003
A BCR 4001 K
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19 |
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1.86 |
2.77 |
129.6 |
-0.04 |
0.27 |
15.3 |
79 |
10 |
2 |
5 |
22 |
4 |
0 |
0 |
CLA 1103 A CLA 1104 A CLA 1111 A CLA 1119 A CLA
1120 A CLA 1122 A CLA 1123 A CLA 1124 A CLA 1125
A CLA 1127 A CLA 1128 A CLA 1129 A CLA 1130 A CLA
1133 A CLA 1137 A CLA 1141 A BCR 4007 A BCR 4008
A LHG 5001 A LMG 5006 A
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20 |
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1.62 |
3.09 |
136.0 |
0.29 |
0.75 |
10.4 |
68 |
6 |
1 |
5 |
20 |
20 |
1 |
0 |
CL0 1011 A CLA 1012 A CLA 1013 A CLA 1131 A CLA
1132 A BCR 4017 A CLA 1021 B CLA 1022 B CLA 1023
B CLA 1204 B CLA 1205 B CLA 1206 B CLA 1207 B CLA
1224 B CLA 1238 B CLA 1239 B BCR 4018 I BCR 4020 I
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21 |
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1.69 |
1.91 |
141.4 |
1.53 |
0.80 |
4.7 |
75 |
4 |
0 |
4 |
25 |
12 |
1 |
0 |
CLA 1012 A CLA 1013 A CLA 1101 A CLA 1103 A CLA
1104 A CLA 1106 A CLA 1107 A CLA 1111 A CLA 1117
A CLA 1126 A CLA 1127 A CLA 1140 A BCR 4003 A BCR
4011 A CLA 1229 B CLA 1230 B CLA 1301 F BCR 4014
F LMG 5004 F BCR 4012 J DGD 5001 J
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22 |
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2.85 |
3.87 |
140.4 |
1.29 |
0.86 |
7.5 |
74 |
6 |
0 |
4 |
22 |
13 |
0 |
0 |
CLA 1012 A CLA 1013 A CLA 1101 A CLA 1103 A CLA
1104 A CLA 1106 A CLA 1107 A CLA 1111 A CLA 1117
A CLA 1126 A CLA 1127 A CLA 1140 A BCR 4003 A BCR
4011 A CLA 1222 B CLA 1223 B CLA 1228 B CLA 1229
B CLA 1230 B CLA 1231 B CLA 1234 B CLA 1235 B CLA
1236 B CLA 1240 B CLA 1301 F CLA 1302 F BCR 4014
F BCR 4016 F BCR 4012 J DGD 5001 J
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23 |
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1.38 |
1.94 |
147.2 |
0.50 |
0.75 |
8.6 |
68 |
8 |
2 |
3 |
20 |
20 |
3 |
0 |
CL0 1011 A CLA 1012 A CLA 1013 A CLA 1131 A CLA
1138 A CLA 1139 A CLA 1140 A PQN 2001 A BCR 4017
A CLA 1021 B CLA 1022 B CLA 1023 B CLA 1237 B CLA
1238 B CLA 1239 B PQN 2002 B BCR 4014 F BCR 4019 L
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24 |
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1.32 |
2.06 |
153.5 |
0.44 |
0.52 |
8.6 |
71 |
8 |
1 |
5 |
23 |
17 |
2 |
0 |
CL0 1011 A CLA 1012 A CLA 1013 A CLA 1131 A CLA
1132 A CLA 1138 A CLA 1139 A CLA 1140 A PQN 2001
A BCR 4017 A CLA 1021 B CLA 1022 B CLA 1023 B CLA
1206 B CLA 1207 B CLA 1238 B CLA 1239 B BCR 4014
F BCR 4018 I BCR 4020 I
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25 |
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1.34 |
1.47 |
157.3 |
0.62 |
0.71 |
8.2 |
69 |
8 |
2 |
3 |
22 |
21 |
2 |
0 |
CL0 1011 A CLA 1012 A CLA 1013 A CLA 1101 A CLA
1126 A CLA 1131 A CLA 1140 A BCR 4011 A BCR 4017
A CLA 1021 B CLA 1022 B CLA 1023 B CLA 1229 B CLA
1230 B CLA 1237 B CLA 1238 B CLA 1239 B PQN 2002
B CLA 1301 F BCR 4014 F BCR 4012 J DGD 5001 J BCR
4019 L
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26 |
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1.33 |
1.84 |
178.9 |
1.26 |
0.80 |
6.5 |
72 |
6 |
0 |
5 |
35 |
16 |
0 |
0 |
CL0 1011 A CLA 1012 A CLA 1013 A CLA 1101 A CLA
1103 A CLA 1104 A CLA 1106 A CLA 1107 A CLA 1111
A CLA 1117 A CLA 1126 A CLA 1127 A CLA 1131 A CLA
1132 A CLA 1140 A BCR 4003 A BCR 4011 A BCR 4017
A CLA 1021 B CLA 1022 B CLA 1023 B CLA 1206 B CLA
1207 B CLA 1230 B CLA 1237 B CLA 1238 B CLA 1239
B BCR 4018 I BCR 4020 I BCR 4012 J
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27 |
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1.76 |
4.30 |
296.2 |
-0.10 |
0.11 |
10.8 |
80 |
7 |
4 |
9 |
22 |
9 |
5 |
0 |
LUT 501 2 XAT 502 2 CLA 601 2 CLA 604 2 CLA 605 2
CLA 612 2 CHL 615 2 LMG 802 2 LHG 807 2 CLA 1101
A CLA 1102 A CLA 1104 A CLA 1128 A CLA 1138 A CLA
1139 A CLA 1140 A PQN 2001 A LHG 5002 A CLA 1229
B CLA 1301 F BCR 4014 F LMG 5001 F DGD 5005 F LMG
5006 F
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28 |
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1.90 |
2.87 |
25.6 |
0.31 |
0.15 |
15.7 |
73 |
3 |
4 |
0 |
8 |
2 |
1 |
0 |
CLA 604 4
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29 |
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2.03 |
2.03 |
26.0 |
-1.00 |
-0.23 |
12.5 |
68 |
2 |
1 |
1 |
3 |
2 |
2 |
0 |
LUT 501 4 CLA 601 4 CHL 611 4
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30 |
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1.82 |
2.72 |
49.2 |
-0.29 |
0.38 |
7.1 |
66 |
2 |
0 |
1 |
3 |
4 |
2 |
0 |
BCR 503 1 CLA 603 1 CLA 604 1 CHL 609 1 LHG 801 1
CLA 617 4
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31 |
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1.85 |
2.16 |
94.7 |
0.36 |
0.65 |
9.3 |
68 |
5 |
3 |
0 |
9 |
8 |
2 |
0 |
LUT 502 1 BCR 503 1 CLA 604 1 CLA 607 1 CHL 609 1
LHG 801 1 LUT 501 4 CLA 601 4 CLA 606 4 CHL 611 4
CHL 613 4 CHL 615 4 CLA 617 4
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program