PDBsum entry 6y2f Go to PDB code:  Tunnel analysis for: 6y2f calculated with MOLE 2.0 PDB id 6y2f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.88 1.89 16.6 -0.36 -0.20 7.4 85 2 1 1 2 0 1 0  DMS 501 A O6K 502 A 2 1.86 1.87 17.2 -0.32 -0.13 8.3 89 2 2 2 2 0 0 0  O6K 502 A 3 1.84 1.87 17.4 -1.07 -0.02 17.6 88 2 1 1 1 0 0 1  O6K 502 A 4 1.15 1.46 19.2 -0.21 -0.07 4.6 71 1 0 1 2 1 2 1  DMS 501 A O6K 502 A 5 1.15 1.46 19.8 -0.24 -0.08 5.3 77 1 1 2 2 1 1 1  O6K 502 A 6 1.14 1.46 20.3 -0.60 0.07 10.4 73 1 0 1 1 1 1 2  O6K 502 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.