 |
PDBsum entry 6xxc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 6xxc calculated with  MOLE 2.0
|
PDB id
|
|
|
|
6xxc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
2 tunnels,
coloured by tunnel radius |
|
3 tunnels,
coloured by
tunnel radius
|
3 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.52 |
1.80 |
17.3 |
-0.40 |
-0.01 |
10.7 |
78 |
|
2 |
2 |
2 |
2 |
2 |
1 |
1 |
|
O3W 301 B
|
 |
|
2 |
 |
1.23 |
2.95 |
19.3 |
-1.79 |
-0.50 |
20.1 |
86 |
2 |
1 |
3 |
2 |
1 |
0 |
0 |
|
 |
3 |
 |
1.51 |
1.77 |
30.5 |
-0.60 |
-0.02 |
8.5 |
80 |
2 |
2 |
5 |
3 |
2 |
2 |
1 |
O3W 301 B
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program