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PDBsum entry 6xbl

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6xbl calculated with MOLE 2.0 PDB id
6xbl
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.86 4.66 32.5 -1.08 -0.48 11.8 90 2 3 6 1 2 0 0  
2 1.18 1.22 40.7 0.25 0.46 11.2 74 2 2 3 6 7 0 1  V0S 701 R CLR 702 R
3 1.33 1.40 41.1 -0.75 0.27 11.3 76 0 4 6 3 5 1 1  V0S 701 R
4 1.18 1.19 47.2 -0.70 -0.09 12.4 84 2 2 5 7 3 0 1  V0S 701 R CLR 702 R
5 1.18 1.22 52.0 -0.10 0.41 12.8 73 3 6 3 9 8 1 0  V0S 701 R CLR 702 R
6 1.19 1.22 53.5 0.58 0.29 7.4 79 3 1 3 11 6 0 0  CLR 702 R
7 1.17 1.22 54.5 0.21 0.47 9.4 74 2 4 4 7 8 1 0  V0S 701 R CLR 702 R
8 2.06 3.02 84.9 -1.58 -0.45 19.7 87 9 3 9 3 1 2 2  
9 1.17 1.22 86.8 0.89 0.21 8.5 81 3 3 1 12 7 0 0  CLR 702 R
10 1.41 2.11 100.0 0.11 0.20 11.1 81 5 5 4 13 8 0 1  V0S 701 R CLR 702 R
11 1.59 1.88 100.8 -1.55 -0.42 18.3 89 11 7 13 5 3 1 0  
12 1.53 2.34 110.4 -1.12 -0.10 20.4 76 5 4 4 6 4 0 1  V0S 701 R
13 1.16 1.17 112.8 0.26 0.07 10.1 84 6 4 4 19 7 0 0  CLR 702 R
14 1.42 1.60 121.1 -1.68 -0.14 21.0 77 5 7 8 6 5 1 2  V0S 701 R
15 1.29 1.25 135.7 -1.41 -0.25 19.3 80 7 6 7 12 4 1 1  V0S 701 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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