 |
PDBsum entry 6x3c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 6x3c calculated with  MOLE 2.0
|
PDB id
|
|
|
|
6x3c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
6 tunnels,
coloured by tunnel radius |
|
7 tunnels,
coloured by
tunnel radius
|
7 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.67 |
2.87 |
33.0 |
-3.15 |
-0.80 |
32.2 |
87 |
|
5 |
7 |
5 |
0 |
0 |
0 |
0 |
|
|
 |
|
2 |
 |
1.93 |
2.82 |
33.9 |
-2.87 |
-0.74 |
30.2 |
85 |
6 |
7 |
5 |
1 |
0 |
0 |
0 |
|
|
3 |
 |
1.93 |
2.82 |
34.6 |
-3.05 |
-0.80 |
30.7 |
85 |
7 |
7 |
5 |
0 |
0 |
0 |
0 |
|
|
4 |
 |
1.66 |
2.89 |
36.2 |
-3.14 |
-0.81 |
31.7 |
84 |
7 |
8 |
4 |
0 |
0 |
0 |
0 |
|
|
5 |
 |
1.66 |
2.89 |
37.8 |
-3.43 |
-0.76 |
36.1 |
84 |
6 |
9 |
4 |
0 |
0 |
0 |
0 |
|
|
6 |
 |
1.93 |
2.82 |
38.1 |
-2.90 |
-0.77 |
31.0 |
83 |
5 |
7 |
5 |
1 |
1 |
0 |
0 |
PO4 305 B
|
 |
7 |
 |
1.66 |
2.89 |
40.9 |
-3.14 |
-0.74 |
32.7 |
82 |
7 |
7 |
5 |
1 |
1 |
0 |
0 |
CL 308 E CL 306 F
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program