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PDBsum entry 6whl

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Pore analysis for: 6whl calculated with MOLE 2.0 PDB id
6whl
Pores calculated on whole structure Pores calculated excluding ligands

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27 pores, coloured by radius 26 pores, coloured by radius 26 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.38 31.9 -0.06 0.11 10.4 80 3 1 0 5 3 0 0  MSE 182 A
2 1.38 1.38 32.9 -0.43 0.05 7.1 77 2 2 0 4 4 0 0  MSE 182 D
3 1.64 1.79 37.1 -0.18 -0.05 10.5 74 5 2 5 4 1 1 0  
4 3.11 3.22 40.9 -1.54 -0.66 13.8 87 0 4 5 0 4 0 0  
5 3.45 3.56 42.3 -2.28 -0.74 16.6 87 4 6 8 0 2 0 0  
6 1.62 1.96 43.0 -2.18 -0.59 21.9 85 5 3 8 1 1 1 0  
7 1.39 1.39 43.3 0.39 0.16 6.9 81 3 0 3 6 6 1 0  MSE 182 I
8 2.87 2.99 46.8 -2.59 -0.53 26.2 79 7 4 2 0 2 0 0  
9 1.65 1.65 48.7 -2.74 -0.72 26.8 85 5 5 7 0 1 0 0  
10 1.39 1.39 49.4 0.16 0.23 7.1 75 4 0 3 7 8 1 0  GOL 301 C MSE 182 D
11 2.07 2.24 56.4 -0.53 -0.03 13.2 80 6 3 7 4 6 1 0  GOL 302 C
12 1.67 1.67 57.2 -2.16 -0.74 13.9 90 2 6 9 0 2 0 0  
13 1.31 1.51 57.1 -2.41 -0.64 19.0 83 7 3 6 1 2 1 0  MSE 177 G
14 2.02 2.13 61.0 -0.59 0.05 11.2 78 5 3 6 4 6 2 0  
15 1.62 1.89 62.7 -0.87 -0.29 13.9 79 5 4 8 5 6 1 0  GOL 301 A
16 1.80 1.80 65.3 -2.76 -0.71 22.1 86 5 7 9 0 2 0 0  
17 1.69 1.68 65.5 -1.13 -0.41 16.3 78 7 4 8 4 2 1 0  
18 2.01 2.19 67.1 -1.29 -0.36 13.2 80 6 2 9 2 7 2 0  GOL 301 A
19 1.65 1.66 68.3 -1.32 -0.37 19.1 79 5 5 9 4 1 0 0  
20 2.09 2.34 77.3 -1.41 -0.39 14.5 84 8 5 12 2 5 1 0  GOL 302 C
21 1.31 1.49 77.3 -2.53 -0.63 22.7 83 10 4 8 1 2 1 0  
22 1.35 1.35 79.3 -0.29 -0.09 10.8 81 7 3 7 9 6 1 0  MSE 182 A
23 1.90 1.91 82.8 -0.97 -0.21 17.4 79 9 6 8 6 7 1 0  GOL 301 H
24 1.38 1.38 83.7 -0.64 -0.15 10.5 83 8 1 8 6 6 2 0  MSE 182 A
25 1.65 1.67 93.0 -1.47 -0.49 13.5 85 7 8 13 2 5 1 0  GOL 302 C
26 1.69 1.68 111.7 -2.52 -0.72 21.6 86 9 8 13 0 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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