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PDBsum entry 6w3e

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6w3e calculated with MOLE 2.0 PDB id
6w3e
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.40 2.83 26.9 -2.40 -0.54 23.9 83 4 3 5 1 0 2 0  
2 2.31 2.83 39.7 -2.21 -0.50 22.9 85 6 4 7 2 0 0 0  
3 1.73 2.57 43.1 -1.00 -0.38 14.0 78 5 2 6 4 0 1 1  
4 2.38 2.83 49.2 -2.43 -0.61 21.8 82 9 4 7 2 0 1 0  
5 1.08 1.40 49.3 -0.59 -0.18 16.4 76 4 4 4 3 1 1 1  
6 1.56 2.80 49.7 -1.28 -0.24 19.8 74 7 5 6 4 2 3 0  
7 1.73 2.58 50.9 -1.54 -0.46 18.6 84 5 4 7 5 0 0 0  
8 1.73 2.59 54.0 -1.74 -0.45 16.6 83 7 4 7 4 0 2 0  
9 1.53 2.85 58.2 -0.87 -0.18 18.4 74 6 5 5 6 2 2 0  
10 2.80 3.15 62.6 -1.70 -0.24 18.4 79 7 1 6 2 2 2 0  
11 1.73 2.54 71.4 -0.60 -0.03 15.7 81 6 2 5 3 2 0 0  
12 2.80 3.11 75.5 -1.62 -0.31 18.1 81 10 2 9 2 2 1 0  
13 2.19 2.33 32.3 -0.67 -0.13 22.3 78 4 3 2 5 1 0 1  SJV 1001 B
14 1.81 3.05 39.8 -2.03 -0.51 29.8 84 3 3 1 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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