PDBsum entry 6vqc Go to PDB code:  Pore analysis for: 6vqc calculated with MOLE 2.0 PDB id 6vqc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   21 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.10 2.10 33.4 2.30 0.82 1.4 88 1 0 3 11 3 0 0   2 2.10 2.09 33.8 2.28 0.77 1.6 87 1 0 2 12 2 0 0   3 1.73 2.01 34.4 -0.93 -0.08 19.0 73 4 2 0 5 3 0 0   4 1.26 2.40 37.9 0.40 0.24 7.3 73 2 3 1 3 5 1 0   5 1.13 2.76 38.9 -0.06 0.23 6.2 81 3 1 4 7 4 2 0   6 1.12 2.75 45.2 0.73 0.44 3.3 77 1 3 3 9 5 3 0   7 1.43 2.39 55.9 -2.44 -0.60 29.4 83 3 7 4 3 1 3 0   8 1.26 2.55 81.1 -0.83 -0.03 14.0 80 5 3 6 5 7 1 0   9 1.85 2.87 84.2 -1.56 -0.24 22.2 82 9 9 8 10 5 1 0   10 2.31 2.93 108.0 1.30 0.75 3.4 65 1 4 2 15 24 2 2   11 2.98 3.64 108.1 0.50 0.51 8.6 70 4 7 5 13 19 1 0   12 2.07 2.66 111.3 0.55 0.24 9.7 86 3 5 5 19 4 1 0   13 2.30 2.92 112.0 0.42 0.49 8.7 70 3 7 6 16 20 3 2   14 1.21 1.24 117.8 0.96 0.53 5.7 71 3 4 2 25 16 2 2   15 1.21 1.24 121.4 0.84 0.50 7.9 71 2 5 1 20 15 1 0   16 1.99 2.68 127.7 -0.01 0.34 13.6 72 10 7 5 19 16 2 2   17 1.99 2.64 138.7 -0.16 0.31 15.2 73 10 8 4 15 15 1 0   18 1.20 1.25 141.8 0.82 0.44 7.3 74 3 3 4 27 17 2 2   19 1.57 2.49 150.5 -0.32 0.21 15.5 74 10 6 7 19 16 2 2   20 2.25 2.47 160.5 0.48 0.42 8.7 68 1 6 5 16 24 3 2   21 1.32 2.50 35.3 0.05 -0.05 12.9 84 2 2 3 8 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.