PDBsum entry 6vls Go to PDB code:  Pore analysis for: 6vls calculated with MOLE 2.0 PDB id 6vls Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.43 3.52 33.1 -1.98 -0.32 20.3 78 6 3 2 2 1 1 0   2 1.63 1.74 45.1 -0.43 -0.05 2.1 91 0 0 6 4 3 0 0   3 2.31 3.28 76.4 -2.19 -0.55 27.5 80 10 9 3 4 1 2 0   4 2.74 2.74 78.4 -2.26 -0.55 24.7 80 7 8 6 2 5 1 0  PEG 1001 D 5 3.52 4.64 78.5 -2.32 -0.59 29.3 82 11 6 4 3 0 1 0   6 1.54 3.02 31.0 -0.09 -0.09 15.6 86 2 3 2 7 1 0 0   7 2.64 2.64 38.4 -1.17 -0.29 12.0 88 2 2 8 4 1 3 0  PEG 1001 C 8 1.68 1.92 44.4 -0.88 -0.35 7.0 88 1 2 7 5 1 2 0  PEG 1001 C 9 1.25 2.49 46.3 0.00 -0.16 11.8 93 2 4 5 6 1 0 0   10 1.72 1.82 61.1 -1.54 -0.58 16.8 91 3 4 7 6 0 1 0   11 1.22 2.44 71.3 -0.54 -0.21 10.0 88 2 5 9 8 2 2 0  PEG 1001 C 12 1.24 1.43 76.7 1.04 0.40 7.8 78 2 5 2 15 5 0 0   13 1.23 2.42 77.6 -0.69 -0.37 15.1 88 3 7 6 7 1 0 0   14 1.23 2.48 103.5 -0.88 -0.32 18.7 88 6 7 7 8 1 0 0   15 1.32 1.37 39.7 0.75 0.12 12.1 77 1 2 0 11 0 0 1   16 1.41 1.99 30.5 -0.14 0.23 8.3 76 1 2 2 1 3 0 0   17 1.20 1.47 31.5 -1.88 -0.19 16.6 71 1 3 3 0 4 1 0  PEG 1001 A 18 1.52 1.52 42.8 -1.70 -0.19 22.7 72 3 3 1 1 4 0 0   19 1.19 1.29 91.1 -2.66 -0.60 28.8 86 10 7 7 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.