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PDBsum entry 6vb2

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6vb2 calculated with MOLE 2.0 PDB id
6vb2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 1.79 15.0 -1.27 -0.18 4.8 66 1 0 2 1 4 1 0  
2 1.70 1.74 26.1 -1.62 -0.14 20.6 76 2 3 3 2 5 1 0  GOL 302 A
3 1.63 1.66 26.2 -1.21 -0.03 16.0 75 2 4 2 3 4 1 0  GOL 302 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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