PDBsum entry 6v8s Go to PDB code:  Tunnel analysis for: 6v8s calculated with MOLE 2.0 PDB id 6v8s Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 20 tunnels, coloured by tunnel radius 20 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.90 2.25 36.2 0.49 0.29 12.0 85 3 2 2 8 4 0 0  2AN 302 G 2AN 304 G 2 1.73 1.86 36.5 0.04 0.24 13.0 80 2 5 2 5 5 0 0  2AN 304 G 2AN 306 G 3 1.91 2.80 36.7 1.17 0.64 8.6 85 2 0 2 11 4 0 0  2AN 302 G 2AN 304 G 4 1.87 2.00 36.8 -0.63 -0.31 15.7 81 0 6 2 4 4 0 0  2AN 303 G 5 1.28 2.29 38.2 0.48 0.32 12.2 85 3 2 2 9 3 0 0  2AN 302 G 2AN 304 G 6 1.28 2.28 38.4 -0.12 0.21 13.5 80 2 5 2 6 4 0 0  2AN 304 G 2AN 306 G 7 1.28 2.35 38.6 1.15 0.63 8.6 85 2 0 2 12 3 0 0  2AN 302 G 2AN 304 G 8 1.28 2.29 38.7 -0.79 -0.35 16.6 81 0 6 2 5 3 0 0  2AN 303 G 9 1.30 1.34 40.8 -0.31 0.02 16.7 83 2 5 0 8 4 0 0   10 1.28 2.29 42.7 -0.38 0.02 17.3 84 2 5 0 10 3 0 0   11 1.25 1.30 43.5 -0.57 -0.06 14.1 81 2 2 1 6 4 1 0   12 1.24 1.32 44.8 -0.72 -0.14 15.5 79 2 5 1 5 4 1 0  2AN 1106 H 13 1.28 2.25 45.4 -0.70 -0.12 15.4 81 2 2 1 7 3 1 0   14 1.26 1.31 46.8 -0.74 -0.14 15.7 80 2 5 1 6 3 1 0  2AN 1106 H 15 1.24 1.31 48.4 -0.25 0.02 13.0 83 3 4 1 8 4 0 0  2AN 308 C 2AN 702 D 16 1.28 1.30 50.4 -0.27 0.00 13.0 82 3 4 1 8 3 0 0  2AN 308 C 2AN 702 D 17 1.30 1.31 55.4 -0.30 -0.08 14.2 85 3 5 2 6 4 0 0  2AN 308 C 2AN 702 D 18 1.28 2.25 57.3 -0.38 -0.07 14.8 86 3 5 2 8 3 0 0  2AN 308 C 2AN 702 D 19 1.30 1.41 67.8 -0.92 0.05 16.8 76 6 5 3 8 6 0 0  2AN 309 C 2AN 205 F 20 1.29 2.34 69.7 -0.89 0.05 16.9 76 6 5 3 9 5 0 0  2AN 309 C 2AN 205 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.