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PDBsum entry 6v8c

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6v8c calculated with MOLE 2.0 PDB id
6v8c
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 1.95 26.9 -1.96 -0.26 26.6 73 5 2 1 2 0 2 1  
2 2.77 2.89 40.6 -2.42 -0.78 25.0 82 4 7 2 0 0 1 0  
3 2.77 2.89 41.5 -2.37 -0.66 23.7 78 6 7 2 0 1 1 0  
4 1.40 2.03 49.7 -2.72 -0.51 31.7 76 6 8 2 0 2 1 0  
5 1.73 2.05 61.7 -2.23 -0.54 27.0 74 7 6 2 3 1 2 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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