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PDBsum entry 6v0v

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6v0v calculated with MOLE 2.0 PDB id
6v0v
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.48 1.48 23.7 1.76 0.38 3.3 90 0 1 3 6 1 1 0  
2 1.45 3.85 25.6 1.29 0.50 4.4 84 0 2 3 6 2 0 0  
3 1.19 2.69 34.9 2.05 0.55 2.7 86 0 1 2 10 1 1 1  
4 1.20 2.34 21.0 -0.33 -0.02 14.7 79 1 4 1 3 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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