PDBsum entry 6udc Go to PDB code:  Tunnel analysis for: 6udc calculated with MOLE 2.0 PDB id 6udc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.35 79.7 -1.01 0.08 9.7 78 5 3 13 6 8 0 0  DV7 110 B BTN 5001 B DV7 110 C BTN 5001 C 2 1.27 1.27 17.4 -2.26 -0.62 26.1 95 2 2 4 2 0 0 0   3 1.27 1.27 18.1 -1.66 -0.57 22.6 95 2 2 3 3 0 0 0   4 1.21 1.21 16.1 -2.01 -0.67 24.3 92 2 2 2 1 0 0 0   5 1.21 1.21 16.3 -1.78 -0.56 21.3 91 2 2 2 2 0 0 0   6 1.26 1.26 18.6 -1.29 -0.57 19.4 93 2 1 1 2 0 0 0   7 1.25 1.25 16.6 -1.64 -0.51 20.7 91 2 2 2 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.