PDBsum entry 6tyk Go to PDB code:  Tunnel analysis for: 6tyk calculated with MOLE 2.0 PDB id 6tyk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.35 2.28 22.3 -1.93 -0.34 19.0 72 7 0 0 0 2 2 0  FMN 301 B 2 1.40 1.62 27.8 -2.18 -0.53 23.1 77 8 0 0 0 1 2 0  FMN 301 B 3 1.39 1.62 29.4 -1.05 -0.11 13.1 66 4 0 0 3 5 3 0  FMN 301 B IYR 302 B 4 1.31 1.49 19.2 -1.90 -0.34 18.5 71 6 0 0 0 2 2 0  FMN 301 A 5 1.37 1.58 26.5 -0.71 -0.12 12.2 67 4 0 0 3 5 2 0  FMN 301 A IYR 302 A 6 1.34 1.34 16.1 -1.48 -0.40 16.6 76 2 0 3 1 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.