 |
PDBsum entry 6tux
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 6tux calculated with  MOLE 2.0
|
PDB id
|
|
|
|
6tux
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
6 pores,
coloured by radius |
|
6 pores,
coloured by radius
|
6 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
3.02 |
3.70 |
38.9 |
-1.23 |
-0.20 |
21.1 |
82 |
|
5 |
1 |
4 |
5 |
0 |
0 |
0 |
|
|
 |
|
2 |
 |
2.21 |
2.21 |
47.8 |
-0.83 |
-0.56 |
6.2 |
75 |
2 |
0 |
2 |
1 |
0 |
2 |
1 |
DG 6 E DT 9 E DT 10 E DA 3 F DT 5 F DC 6 F
|
|
3 |
 |
2.15 |
3.58 |
62.4 |
-1.19 |
-0.32 |
23.1 |
79 |
6 |
4 |
1 |
7 |
0 |
1 |
0 |
|
|
4 |
 |
1.58 |
2.25 |
63.4 |
-2.01 |
-0.53 |
19.5 |
77 |
6 |
3 |
5 |
3 |
0 |
3 |
0 |
DT 5 D
|
|
5 |
 |
1.65 |
1.68 |
81.8 |
-1.86 |
-0.37 |
24.2 |
83 |
8 |
4 |
4 |
6 |
1 |
0 |
0 |
|
 |
6 |
 |
2.80 |
4.00 |
94.3 |
-1.70 |
-0.12 |
29.7 |
77 |
10 |
6 |
1 |
7 |
2 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program