spacer
spacer

PDBsum entry 6tuf

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 6tuf calculated with MOLE 2.0 PDB id
6tuf
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 1.70 19.0 -1.66 -0.23 20.2 74 3 2 2 2 3 1 0  NAP 402 A
2 1.70 1.70 19.5 -0.58 0.94 8.8 56 1 1 0 2 7 1 1  NAP 402 A NXQ 403 A
3 1.71 1.70 23.3 -0.72 0.02 15.1 74 3 2 2 4 3 1 0  NAP 402 A
4 1.66 1.66 30.9 -0.08 0.73 6.8 57 1 2 0 4 7 0 1  NAP 402 A NXQ 403 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer