PDBsum entry 6tqn Go to PDB code:  Pore analysis for: 6tqn calculated with MOLE 2.0 PDB id 6tqn Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   28 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.79 32.2 -0.63 -0.31 14.0 83 3 4 3 6 1 1 0   2 2.61 2.72 37.4 -0.04 -0.20 8.8 85 4 1 2 7 0 1 0  DC 8 L DG 9 L DC 10 L DC 12 L U 75 R 3 1.14 1.79 51.0 -0.32 -0.25 15.7 80 3 5 1 6 1 1 0  DC 8 L DG 9 L U 75 R 4 1.71 1.75 71.9 -1.99 -0.48 21.5 79 14 1 4 3 1 2 1  DG -17 K DA -16 K DG -15 K DC - 14 K DC 12 L DT 13 L DC 17 L DG 18 L U 61 R 5 2.50 2.60 88.8 -1.11 -0.55 12.3 77 7 2 3 4 1 3 0  DG 2 K DT 1 L DC 3 L DC 4 L DA 5 L DC 6 L DA 7 L DC 8 L U 75 R G 76 R C 78 R G 79 R U 80 R G 81 R U 82 R 6 1.26 2.15 93.2 -1.23 -0.37 17.3 83 8 5 6 10 1 3 1  DG -17 K DA -16 K DG -15 K DC - 14 K DC 12 L DT 13 L DC 17 L DG 18 L 7 2.37 2.37 93.7 -1.86 -0.69 19.3 87 9 1 5 2 0 2 0  DA -2 K DT 0 K DT 1 K DG 2 K DT 3 K DT -5 L DC - 4 L DC -2 L DC 10 L DC 12 L U 80 R 8 1.25 1.32 100.7 -0.52 -0.15 17.4 82 7 10 3 7 3 0 0   9 2.33 2.44 101.0 -1.68 -0.68 16.0 81 8 4 8 3 2 2 0  DG 2 K 10 3.38 3.39 101.0 -2.10 -0.53 29.7 83 9 11 3 8 0 2 0   11 1.61 1.64 127.6 -1.54 -0.60 15.6 84 13 7 11 11 1 4 0  DT 1 L DC 3 L DC 4 L DA 5 L DC 6 L DA 7 L DC 8 L DG 9 L DC 10 L DC 12 L U 75 R G 76 R C 78 R G 79 R U 80 R G 81 R U 82 R C 85 R 12 2.35 2.39 142.6 -1.12 -0.41 18.4 84 14 12 7 16 0 4 0  DC 6 L DA 7 L DC 8 L DG 9 L DC 10 L DC 12 L U 75 R 13 2.11 3.40 143.7 -2.38 -0.62 27.9 84 14 13 11 7 0 1 0  U 39 R U 61 R 14 1.71 1.75 160.3 -1.91 -0.53 23.6 82 15 13 11 9 1 3 1  DG -17 K DA -16 K DG -15 K DC - 14 K DC 12 L DT 13 L DC 17 L DG 18 L U 39 R 15 1.50 3.38 168.8 -1.08 -0.33 14.8 84 9 9 9 13 4 2 0  DC 8 L DG 9 L DC 10 L DC 12 L U 75 R 16 1.47 3.61 173.8 -2.02 -0.51 21.8 82 14 10 10 9 4 1 0  U 61 R G 66 R 17 1.22 3.50 177.8 -1.80 -0.50 23.4 83 15 16 10 9 2 2 0  U 39 R A 40 R A 41 R G 65 R G 66 R 18 1.15 1.80 208.6 -1.38 -0.28 20.4 81 18 14 9 15 5 1 0  U 61 R G 66 R 19 1.26 2.46 214.8 -2.17 -0.41 26.4 80 30 17 11 12 9 4 0  DA 5 K DG 6 K 20 1.20 1.35 255.1 -0.88 -0.36 14.0 81 21 18 12 28 5 10 1  DT 0 K DT 1 K DG 2 K DT 3 K DG 4 K DA 5 K DC - 8 L DG -7 L DC -6 L DT -5 L DC -4 L DC - 2 L DA 0 L DC 4 L DA 5 L DC 6 L DA 7 L DC 8 L U 75 R G 76 R C 78 R G 79 R U 80 R G 81 R U 82 R 21 1.30 1.28 257.2 -1.86 -0.51 22.4 83 18 22 17 12 4 2 0  U 39 R 22 1.22 2.34 273.6 -1.12 -0.20 19.6 78 28 26 8 28 10 8 0  DG 4 K DA 5 K DG 6 K DC 7 K DC -9 L DC -8 L DG - 7 L 23 1.25 1.52 326.4 -1.46 -0.47 19.7 80 28 25 16 23 6 9 0  DT 0 K DT 1 K DG 2 K DT 3 K DG 4 K DA 5 K DC - 8 L DG -7 L DC -6 L DT -5 L DC -4 L DC - 2 L DA 0 L DC 4 L DA 5 L DC 6 L DA 7 L DC 8 L U 39 R U 75 R G 76 R C 78 R G 79 R U 80 R G 81 R U 82 R 24 1.71 2.04 27.9 0.90 0.27 4.8 74 1 0 1 10 3 0 0   25 1.24 1.80 28.3 0.68 0.21 6.3 84 3 0 1 6 3 0 0   26 1.21 1.74 32.0 2.26 0.53 3.1 80 0 1 1 11 0 1 0   27 1.22 1.32 34.7 2.12 0.45 4.4 77 0 1 1 13 0 1 0   28 1.28 1.77 35.6 2.34 0.64 6.6 77 0 2 0 14 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.