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PDBsum entry 6tqb

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 6tqb calculated with MOLE 2.0 PDB id
6tqb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 1.38 19.1 -0.12 -0.14 14.6 87 2 0 1 4 0 0 0  A 10 B U 11 B A 12 B
2 1.20 1.37 23.4 -0.12 -0.23 12.4 86 2 0 0 4 0 0 0  G 4 B U 9 B A 10 B A 12 B U 14 B A 15 B A 16 B NA
104 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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