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PDBsum entry 6tq6

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6tq6 calculated with MOLE 2.0 PDB id
6tq6
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.87 1.88 38.1 -1.38 -0.50 15.9 84 6 1 3 5 2 0 0  SO4 402 A SOG 406 A
2 1.68 2.74 42.8 0.86 0.25 7.5 77 4 0 2 10 3 1 1  PGW 404 A SOG 406 A PGW 404 B
3 1.60 2.83 42.9 0.78 0.23 7.7 75 4 0 1 10 3 1 1  PGW 404 A SOG 406 A PGW 404 B
4 1.87 1.89 43.4 -0.77 -0.32 12.3 80 6 1 2 6 2 0 0  SOG 406 A SO4 402 B SO4 403 B
5 1.69 2.79 44.8 2.14 0.62 1.4 73 1 0 1 12 4 1 1  PGW 404 A SOG 406 A PGW 404 B
6 1.58 2.88 46.0 2.09 0.64 1.4 74 1 0 1 13 4 1 1  PGW 404 A SOG 406 A PGW 404 B
7 1.68 2.78 57.2 1.08 0.30 5.0 79 2 1 3 13 5 1 1  SO4 402 A PGW 404 A SOG 406 A PGW 404 B
8 1.83 2.93 58.4 0.89 0.25 5.3 80 2 1 3 14 5 1 1  SO4 402 A PGW 404 A SOG 406 A PGW 404 B
9 1.87 1.88 59.8 -0.81 -0.45 11.6 82 6 1 4 6 3 0 0  SOG 406 A SO4 402 B SO4 403 B
10 1.70 2.84 71.8 0.70 0.19 7.2 78 4 1 3 14 5 1 1  PGW 404 A SOG 406 A SO4 402 B SO4 403 B PGW 404 B
11 1.68 2.79 72.6 0.90 0.27 6.5 79 4 1 3 15 5 1 1  PGW 404 A SOG 406 A SO4 402 B SO4 403 B PGW 404 B
12 1.85 1.86 76.0 -0.54 -0.35 9.2 82 6 2 6 10 6 0 0  SO4 402 A SOG 406 A SO4 402 B SO4 403 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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