spacer
spacer

PDBsum entry 6tpy

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 6tpy calculated with MOLE 2.0 PDB id
6tpy
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.50 1.61 26.7 0.78 0.49 2.9 69 0 2 1 5 3 3 1  EDO 2 B NUB 1 C
2 1.43 1.52 27.0 -0.40 -0.28 8.8 70 1 2 1 3 2 4 0  NUB 1 C
3 1.43 1.52 27.1 -0.16 0.00 7.4 65 1 1 1 3 3 4 0  NUB 1 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer