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PDBsum entry 6tpp

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6tpp calculated with MOLE 2.0 PDB id
6tpp
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.24 2.78 26.4 -0.03 0.59 8.9 67 2 1 2 4 6 1 0  
2 2.14 2.41 27.8 -0.48 0.52 10.8 70 3 1 3 3 6 2 0  
3 1.99 4.46 33.9 0.76 0.67 8.6 70 3 1 3 7 6 1 0  
4 1.88 4.36 38.2 -0.15 0.31 8.6 73 4 4 4 6 4 5 0  
5 1.89 4.41 40.3 0.59 0.63 8.5 69 4 1 4 7 6 2 0  
6 2.15 2.42 49.3 0.86 0.81 8.7 70 4 0 4 9 8 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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