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PDBsum entry 6tpj

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Pore analysis for: 6tpj calculated with MOLE 2.0 PDB id
6tpj
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.73 3.76 30.0 2.15 0.92 3.7 86 1 0 1 9 2 1 0  OLA 1211 A OLA 2111 B OLA 2112 B OLA 2116 B
2 1.17 1.28 31.2 -1.23 -0.13 20.3 83 4 2 3 6 3 1 0  SUV 2101 B PG4 2126 B
3 2.48 4.93 39.4 3.04 1.30 0.6 76 0 0 0 13 5 1 1  OLA 1211 A OLA 2111 B OLA 2112 B OLA 2123 B
4 1.65 1.65 55.4 -1.95 -0.59 24.0 78 3 4 0 1 1 5 0  
5 1.88 2.03 74.0 0.03 0.33 13.4 79 4 1 2 7 4 0 0  OLA 2116 B OLA 2123 B
6 2.02 3.10 77.3 0.29 0.19 9.0 80 2 4 4 13 6 2 1  YCM 147 A OLA 1211 A OLA 1216 A OLA 2110 B OLA
2116 B
7 2.00 3.09 79.0 0.43 0.32 8.8 77 1 4 3 13 7 1 1  YCM 147 A OLA 1216 A OLA 2110 B
8 2.49 4.91 89.4 -0.42 0.07 18.6 78 5 3 2 9 5 0 0  PG4 1217 A OLA 2116 B OLA 2123 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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