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PDBsum entry 6tot
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Pore analysis for: 6tot calculated with MOLE 2.0
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PDB id
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6tot
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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2 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.31 |
1.31 |
48.2 |
0.42 |
0.23 |
6.8 |
85 |
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2 |
2 |
4 |
13 |
3 |
1 |
1 |
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PGW 410 A NRK 401 B
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2 |
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3.27 |
4.65 |
58.1 |
2.38 |
0.76 |
3.6 |
79 |
1 |
1 |
2 |
20 |
4 |
0 |
0 |
SOG 406 A SOG 408 A PGW 409 A SOG 408 B
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3 |
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1.19 |
1.27 |
59.9 |
0.49 |
0.19 |
7.9 |
84 |
2 |
3 |
4 |
16 |
3 |
2 |
1 |
NRK 401 A PGW 409 A PGW 410 A
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4 |
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1.32 |
1.32 |
63.3 |
0.09 |
-0.05 |
9.8 |
84 |
6 |
2 |
6 |
13 |
4 |
1 |
0 |
PGW 409 A PGW 410 A NRK 401 B SOG 407 B
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5 |
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1.17 |
1.26 |
63.3 |
0.40 |
0.18 |
8.4 |
85 |
2 |
4 |
4 |
16 |
4 |
1 |
1 |
NRK 401 A SOG 408 A PGW 409 A
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6 |
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1.32 |
1.37 |
65.9 |
0.99 |
0.27 |
5.9 |
84 |
4 |
2 |
6 |
22 |
4 |
2 |
0 |
SOG 408 A PGW 409 A PGW 410 A NRK 401 B
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7 |
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1.20 |
1.27 |
67.2 |
0.21 |
0.02 |
9.5 |
84 |
5 |
3 |
6 |
14 |
4 |
1 |
0 |
NRK 401 A PGW 409 A SOG 407 B
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8 |
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1.18 |
1.26 |
79.4 |
0.19 |
0.06 |
10.1 |
87 |
5 |
5 |
8 |
22 |
4 |
2 |
0 |
NRK 401 A PGW 409 A PGW 410 A NRK 401 B
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9 |
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1.32 |
1.31 |
93.3 |
0.96 |
0.31 |
6.5 |
82 |
3 |
3 |
4 |
23 |
4 |
2 |
1 |
SOG 408 A PGW 409 A PGW 410 A NRK 401 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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