 |
PDBsum entry 6tjh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 6tjh calculated with  MOLE 2.0
|
PDB id
|
|
|
|
6tjh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
17 tunnels,
coloured by tunnel radius |
|
7 tunnels,
coloured by
tunnel radius
|
7 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.15 |
1.20 |
17.0 |
-2.63 |
-0.48 |
33.9 |
83 |
|
8 |
2 |
1 |
1 |
0 |
0 |
0 |
|
|
 |
|
2 |
 |
1.75 |
1.78 |
36.3 |
-1.93 |
-0.77 |
24.9 |
90 |
2 |
13 |
7 |
7 |
0 |
0 |
0 |
|
|
3 |
 |
1.16 |
1.24 |
38.5 |
-2.45 |
-0.66 |
23.8 |
87 |
9 |
8 |
6 |
4 |
0 |
0 |
0 |
|
|
4 |
 |
1.14 |
1.22 |
39.0 |
-2.55 |
-0.65 |
25.6 |
87 |
8 |
8 |
6 |
5 |
0 |
0 |
0 |
GOL 408 A
|
|
5 |
 |
1.75 |
1.79 |
39.1 |
-1.96 |
-0.83 |
25.2 |
91 |
2 |
13 |
8 |
8 |
0 |
0 |
0 |
|
|
6 |
 |
1.22 |
1.28 |
48.6 |
-2.77 |
-0.76 |
31.7 |
85 |
9 |
16 |
6 |
4 |
0 |
0 |
0 |
|
 |
7 |
 |
1.17 |
1.24 |
51.6 |
-2.79 |
-0.77 |
31.6 |
85 |
8 |
14 |
6 |
4 |
0 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program