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PDBsum entry 6tfs

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6tfs calculated with MOLE 2.0 PDB id
6tfs
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.25 44.2 -1.20 -0.44 13.8 81 4 3 7 5 4 2 0  MSE 480 B N7T 601 B SO4 605 B
2 1.22 1.35 44.4 -1.59 -0.75 14.9 81 3 2 2 1 1 0 0  
3 1.27 2.62 48.9 -0.80 -0.13 7.8 74 1 1 6 2 4 6 0  MSE 480 B
4 1.36 2.73 51.2 -0.73 -0.22 6.9 76 1 2 6 3 3 6 0  MSE 480 A
5 1.96 2.44 52.1 -2.26 -0.69 18.9 81 3 6 7 2 1 2 0  
6 1.43 2.97 76.3 -0.84 -0.20 10.0 78 5 2 8 5 6 4 0  MSE 480 A
7 1.30 3.21 79.1 -0.71 -0.11 11.9 76 6 2 8 4 7 4 0  MSE 480 A
8 1.31 2.80 81.2 -1.44 -0.43 14.7 83 5 7 10 4 3 5 0  MSE 480 A N7T 601 A CL 610 A
9 1.46 1.65 81.3 -1.62 -0.51 13.3 84 4 7 11 5 2 4 0  MSE 480 A N7T 601 A CL 610 A
10 1.66 1.88 85.0 -1.48 -0.53 15.5 75 7 2 3 1 2 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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