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PDBsum entry 6tca

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Pore analysis for: 6tca calculated with MOLE 2.0 PDB id
6tca
Pores calculated on whole structure Pores calculated excluding ligands

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23 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.71 2.80 35.6 -0.69 -0.08 14.6 72 3 3 0 2 3 1 0  
2 2.64 4.38 54.0 -1.46 -0.51 23.2 81 7 7 4 3 0 0 0  
3 1.13 1.47 60.7 -0.27 -0.09 12.0 84 5 5 5 8 2 3 0  39G 401 H
4 1.16 1.58 63.9 0.39 0.12 12.4 83 3 4 2 14 1 3 0  39G 401 H
5 1.14 1.49 64.1 -0.33 0.05 18.4 81 6 6 4 9 3 2 0  39G 401 H
6 1.19 1.23 66.9 -0.36 -0.04 16.7 85 6 7 4 9 1 1 0  
7 1.20 1.23 68.4 -0.34 0.00 16.8 81 6 6 4 11 4 1 0  
8 1.21 1.23 72.3 -0.87 -0.36 18.5 84 5 8 5 10 1 1 0  
9 2.34 2.50 73.8 -1.69 -0.32 27.1 82 9 8 4 4 3 0 0  
10 1.63 1.81 78.4 -1.80 -0.51 25.5 81 9 8 5 3 1 0 0  
11 2.42 2.55 79.0 -1.82 -0.55 26.3 81 8 9 5 5 3 0 0  
12 2.38 2.54 79.9 -1.83 -0.49 23.9 84 10 8 4 3 2 1 0  
13 2.12 2.12 80.6 -1.53 -0.44 22.8 81 12 7 5 8 1 1 0  TPO 180 F PTR 182 F
14 1.20 1.24 81.3 -0.44 -0.14 15.1 82 7 7 4 11 3 2 0  
15 1.18 1.53 82.8 -0.82 -0.34 19.4 84 7 8 6 8 0 2 0  39G 401 H
16 2.50 2.56 85.2 -1.96 -0.66 24.3 83 9 9 5 4 2 1 0  
17 1.65 1.84 87.2 -0.81 -0.26 16.1 82 7 7 7 8 3 0 1  39G 401 F
18 2.03 2.71 87.0 -2.05 -0.57 28.5 81 11 7 4 3 3 0 0  
19 1.61 1.81 87.0 -1.80 -0.41 17.2 79 5 5 6 4 2 1 2  
20 1.78 1.90 108.2 -1.63 -0.50 24.5 83 11 12 9 7 1 0 0  TPO 180 F
21 1.18 1.48 111.4 -0.70 -0.19 18.3 85 9 8 6 10 0 3 0  39G 401 H
22 2.91 2.97 115.5 -2.13 -0.64 30.1 83 15 12 9 6 0 0 0  TPO 180 F
23 1.24 1.66 123.8 -0.81 -0.22 17.7 82 7 8 6 14 2 1 0  
24 1.28 1.42 130.1 -0.93 -0.18 18.9 81 11 10 5 15 5 2 0  
25 2.29 2.64 134.5 -2.03 -0.49 23.1 84 12 9 9 4 5 0 0  
26 1.27 1.55 140.5 -1.46 -0.41 17.1 82 10 7 7 9 2 4 0  
27 1.26 1.57 142.0 -0.96 -0.25 18.7 82 12 8 9 13 3 1 1  PTR 182 D
28 2.85 3.01 163.0 -2.08 -0.57 26.0 85 16 14 14 7 2 0 0  TPO 180 F
29 1.19 1.32 232.4 -1.19 -0.30 20.4 82 15 18 9 19 5 3 0  
30 1.15 1.07 246.4 -1.66 -0.52 19.4 82 13 14 11 12 2 6 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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