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PDBsum entry 6tb2

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6tb2 calculated with MOLE 2.0 PDB id
6tb2
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.52 1.60 35.0 -0.03 -0.09 13.1 80 2 4 2 5 3 1 0  HEM 201 B
2 1.92 2.14 35.7 -0.86 0.04 17.2 78 7 1 2 6 1 2 0  HEM 201 A
3 1.78 1.87 83.2 -1.58 -0.39 23.9 79 7 9 3 5 2 2 0  
4 1.46 1.59 95.2 -1.09 -0.08 18.2 77 10 5 3 8 5 1 0  HEM 201 B
5 1.60 1.59 98.5 -1.41 -0.16 24.4 78 11 4 3 8 3 1 0  HEM 201 B
6 1.48 1.41 101.8 -2.22 -0.44 26.2 77 12 6 4 4 3 3 0  
7 1.63 1.63 103.6 -1.28 -0.18 23.4 78 7 11 4 10 5 1 0  HEM 201 B
8 1.74 1.73 102.9 -2.50 -0.52 31.2 79 13 7 4 4 1 2 0  
9 2.35 3.54 103.5 -1.97 -0.33 26.4 81 8 7 3 3 2 2 0  
10 1.59 1.59 114.8 -1.06 -0.18 17.8 79 9 5 5 8 3 2 0  HEM 201 B
11 2.15 2.68 125.8 -0.79 -0.16 19.8 83 4 7 2 5 2 2 0  
12 1.38 1.34 132.5 -1.84 -0.30 23.3 77 10 11 5 7 5 3 0  
13 2.40 3.53 133.5 -2.06 -0.35 26.9 79 11 11 5 7 3 2 0  
14 1.20 1.18 183.8 -2.13 -0.41 28.0 76 17 14 5 11 6 1 0  HEM 201 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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