spacer
spacer

PDBsum entry 6t93

Go to PDB code: 
Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 6t93 calculated with MOLE 2.0 PDB id
6t93
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 tunnel, coloured by tunnel radius 1 tunnel, coloured by tunnel radius 1 tunnel, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 1.62 108.2 -1.38 -0.39 20.5 79 14 2 2 10 3 0 0  DA 29 I DA 30 I DT 31 I DG 120 J DA 121 J DG 122
J DC 123 J

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer