spacer
spacer

PDBsum entry 6t5u

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6t5u calculated with MOLE 2.0 PDB id
6t5u
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.38 27.0 -1.74 -0.14 20.1 78 3 3 1 2 2 0 1  MKW 203 A
2 1.79 1.89 42.3 -1.00 -0.22 18.8 74 4 3 1 3 3 1 1  MG 201 B GDP 202 B MKW 203 B
3 1.82 1.92 53.5 -1.58 -0.35 25.9 77 7 7 1 3 2 1 1  MG 201 B GDP 202 B MKW 203 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer