spacer
spacer

PDBsum entry 6t5g

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 6t5g calculated with MOLE 2.0 PDB id
6t5g
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 2.45 19.1 0.39 0.55 1.5 61 0 0 1 2 6 1 1  CIT 401 A
2 1.28 2.48 21.5 0.75 0.62 1.5 59 0 0 0 3 6 1 1  CIT 401 A
3 1.26 2.41 21.5 0.81 0.73 1.2 60 0 0 1 2 6 2 1  CIT 401 A
4 1.18 1.28 17.4 -0.99 -0.08 22.4 84 3 1 0 2 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer