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PDBsum entry 6t4a

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6t4a calculated with MOLE 2.0 PDB id
6t4a
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.40 25.9 -1.70 -0.74 22.4 79 4 4 1 0 2 1 0  NA 305 H
2 1.25 1.25 30.1 -0.95 -0.27 13.1 74 2 3 2 3 4 0 0  J5K 302 H
3 1.19 1.80 18.2 0.03 0.42 18.2 79 3 0 0 5 1 1 0  
4 1.35 1.44 22.5 -0.12 0.05 9.1 80 3 0 1 6 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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