PDBsum entry 6spk Go to PDB code:  Tunnel analysis for: 6spk calculated with MOLE 2.0 PDB id 6spk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.25 21.7 -1.12 -0.33 14.1 93 2 1 2 3 0 0 0   2 1.12 1.25 22.0 -1.12 -0.38 13.1 93 2 1 2 3 0 0 0   3 1.13 1.37 24.6 -1.28 -0.48 11.6 88 2 0 2 3 0 0 1   4 1.13 1.36 28.5 -0.42 -0.46 6.8 90 0 1 2 3 0 0 2  SO4 203 J 5 1.13 1.25 35.3 -0.63 -0.41 11.7 89 2 2 3 4 0 0 1  SO4 203 J 6 1.18 1.27 30.3 -0.63 -0.44 9.3 91 1 2 2 3 0 0 1   7 1.18 1.26 37.6 -0.91 -0.43 12.1 89 2 2 3 4 0 0 1  SO4 204 B 8 1.18 1.25 41.9 -0.98 -0.36 12.6 91 2 2 3 3 0 0 0   9 1.61 1.72 19.6 0.55 -0.04 7.3 87 2 1 1 3 0 0 2  LQN 202 A LQN 202 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.