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PDBsum entry 6spi

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6spi calculated with MOLE 2.0 PDB id
6spi
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.44 2.59 52.8 -1.00 -0.56 18.1 75 6 4 0 8 0 1 0  
2 1.57 4.91 53.3 -0.58 -0.24 19.4 74 8 4 0 10 0 1 0  SO4 203 E
3 1.63 5.91 62.1 -0.68 -0.20 22.3 73 8 5 0 15 0 0 0  SO4 203 E
4 1.61 5.84 62.3 -0.99 -0.34 23.5 78 8 7 1 9 0 0 0  SO4 203 E
5 1.52 5.88 76.9 -1.49 -0.41 29.5 77 8 10 1 8 0 0 0  SO4 203 D
6 2.10 2.51 111.4 -1.40 -0.67 19.4 82 8 8 3 5 0 2 0  
7 2.09 2.50 120.9 -1.47 -0.59 22.7 82 9 10 4 9 0 1 0  
8 2.55 4.05 129.6 -1.69 -0.58 24.7 88 6 10 5 4 0 1 0  SO4 203 K
9 2.38 2.56 144.6 -1.92 -0.69 22.0 84 10 10 7 3 0 2 0  SO4 203 F SO4 204 F
10 2.45 2.60 149.1 -1.67 -0.62 23.5 84 8 11 4 6 0 3 0  SO4 203 K
11 2.59 4.02 154.3 -1.69 -0.60 24.5 87 8 11 6 4 0 2 0  SO4 203 K
12 1.74 5.40 167.6 -1.46 -0.43 26.1 80 10 16 4 12 0 2 0  SO4 203 D SO4 203 K

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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