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PDBsum entry 6sio

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6sio calculated with MOLE 2.0 PDB id
6sio
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 1.44 17.2 -1.51 0.01 25.5 69 4 1 1 2 2 0 0  
2 1.33 2.62 19.1 -0.89 -0.04 17.4 78 1 3 2 2 2 1 1  LFQ 304 A
3 1.43 1.58 24.7 -2.26 -0.45 25.4 81 3 3 2 2 2 0 0  TPO 387 P

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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