 |
PDBsum entry 6qw1
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 6qw1 calculated with MOLE 2.0
|
PDB id
|
|
|
|
6qw1
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
9 pores,
coloured by radius |
 |
7 pores,
coloured by radius
|
7 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.55 |
1.78 |
37.9 |
0.48 |
0.29 |
9.3 |
73 |
 |
3 |
0 |
4 |
6 |
4 |
0 |
1 |
 |
IPA 302 A IPA 303 A
|
 |
 |
2 |
 |
1.22 |
1.61 |
38.2 |
-1.28 |
-0.40 |
14.2 |
74 |
0 |
4 |
3 |
0 |
3 |
1 |
0 |
NA 304 B
|
 |
3 |
 |
1.31 |
1.68 |
68.6 |
0.23 |
0.27 |
7.8 |
79 |
5 |
0 |
10 |
5 |
9 |
0 |
1 |
IPA 301 B IPA 303 B
|
 |
4 |
 |
1.41 |
1.67 |
81.3 |
-0.46 |
0.20 |
10.8 |
71 |
6 |
0 |
7 |
3 |
12 |
0 |
2 |
IPA 302 A IPA 301 B IPA 303 B
|
 |
5 |
 |
2.01 |
2.00 |
82.4 |
-0.50 |
-0.13 |
13.1 |
83 |
5 |
2 |
9 |
5 |
6 |
1 |
0 |
|
 |
6 |
 |
1.49 |
1.48 |
99.5 |
-0.78 |
-0.05 |
14.2 |
78 |
7 |
2 |
8 |
6 |
9 |
1 |
1 |
IPA 302 A
|
 |
7 |
 |
1.28 |
1.69 |
134.6 |
-0.76 |
-0.16 |
11.2 |
76 |
7 |
3 |
8 |
4 |
10 |
2 |
1 |
IPA 301 B IPA 303 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |