 |
PDBsum entry 6q7c
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 6q7c calculated with MOLE 2.0
|
PDB id
|
|
|
|
6q7c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
4 tunnels,
coloured by tunnel radius |
 |
7 tunnels,
coloured by
tunnel radius
|
7 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.19 |
1.53 |
18.3 |
1.06 |
0.23 |
5.1 |
86 |
 |
1 |
0 |
1 |
4 |
1 |
0 |
0 |
 |
HOK 1001 A
|
 |
 |
2 |
 |
2.09 |
3.06 |
19.5 |
-0.18 |
0.29 |
16.2 |
79 |
2 |
3 |
0 |
4 |
2 |
0 |
0 |
HOK 1001 A
|
 |
3 |
 |
1.23 |
1.44 |
20.2 |
0.99 |
0.22 |
5.8 |
86 |
2 |
0 |
1 |
4 |
1 |
0 |
0 |
HOK 1001 A
|
 |
4 |
 |
2.09 |
3.07 |
22.4 |
-0.65 |
0.13 |
21.3 |
77 |
3 |
3 |
0 |
5 |
2 |
0 |
0 |
HOK 1001 A
|
 |
5 |
 |
2.10 |
3.07 |
25.4 |
-0.71 |
-0.12 |
18.4 |
77 |
2 |
3 |
1 |
5 |
2 |
0 |
0 |
HOK 1001 A
|
 |
6 |
 |
1.71 |
1.90 |
31.0 |
1.80 |
0.63 |
4.4 |
82 |
2 |
0 |
0 |
8 |
3 |
0 |
0 |
HOK 1001 A
|
 |
7 |
 |
1.12 |
1.23 |
17.8 |
0.53 |
0.58 |
4.2 |
65 |
1 |
0 |
0 |
4 |
3 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |