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PDBsum entry 6pyd
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Pore analysis for: 6pyd calculated with  MOLE 2.0
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PDB id
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6pyd
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.72 |
3.08 |
25.5 |
-0.92 |
-0.63 |
10.2 |
84 |
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1 |
2 |
3 |
3 |
0 |
2 |
0 |
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2 |
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1.61 |
3.03 |
30.3 |
-2.47 |
-0.69 |
23.9 |
84 |
3 |
3 |
2 |
0 |
0 |
2 |
0 |
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3 |
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1.36 |
1.51 |
32.7 |
-1.21 |
-0.34 |
8.7 |
84 |
1 |
0 |
4 |
1 |
3 |
0 |
0 |
P4S 301 H
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4 |
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2.16 |
3.68 |
34.0 |
-0.91 |
-0.43 |
10.3 |
91 |
2 |
2 |
4 |
1 |
0 |
3 |
0 |
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5 |
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2.70 |
3.05 |
72.2 |
-1.27 |
-0.59 |
8.7 |
86 |
1 |
3 |
8 |
4 |
0 |
3 |
0 |
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6 |
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2.72 |
3.05 |
81.6 |
-1.22 |
-0.70 |
8.0 |
89 |
2 |
1 |
13 |
5 |
0 |
1 |
0 |
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7 |
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3.15 |
3.60 |
88.1 |
-1.66 |
-0.68 |
12.2 |
83 |
3 |
6 |
8 |
2 |
0 |
5 |
0 |
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8 |
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3.32 |
3.42 |
89.7 |
-1.63 |
-0.75 |
11.3 |
87 |
3 |
3 |
12 |
2 |
0 |
3 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program