 |
PDBsum entry 6pxh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 6pxh calculated with  MOLE 2.0
|
PDB id
|
|
|
|
6pxh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
6 tunnels,
coloured by tunnel radius |
|
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.38 |
1.45 |
18.8 |
-0.06 |
-0.39 |
5.8 |
90 |
|
1 |
0 |
4 |
3 |
1 |
0 |
0 |
|
|
 |
|
2 |
 |
1.53 |
1.53 |
16.8 |
0.49 |
0.22 |
3.5 |
82 |
1 |
0 |
1 |
3 |
2 |
0 |
0 |
DHF 428 A
|
|
3 |
 |
1.48 |
1.66 |
20.7 |
-0.37 |
-0.41 |
8.7 |
81 |
2 |
1 |
2 |
2 |
2 |
0 |
0 |
SO4 424 A
|
|
4 |
 |
1.45 |
2.25 |
16.8 |
-0.19 |
-0.46 |
5.5 |
93 |
1 |
0 |
4 |
2 |
1 |
0 |
0 |
|
|
5 |
 |
1.51 |
1.51 |
16.8 |
0.48 |
0.23 |
3.2 |
80 |
1 |
0 |
0 |
4 |
2 |
0 |
0 |
DHF 419 B
|
 |
6 |
 |
1.24 |
1.24 |
17.9 |
-0.30 |
-0.50 |
9.9 |
80 |
2 |
1 |
1 |
3 |
0 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program