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PDBsum entry 6pv4
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Pore analysis for: 6pv4 calculated with MOLE 2.0
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PDB id
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6pv4
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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19 pores,
coloured by radius |
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27 pores,
coloured by radius
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27 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.48 |
1.71 |
27.2 |
-1.56 |
-0.49 |
16.0 |
83 |
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3 |
2 |
2 |
2 |
2 |
1 |
0 |
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2 |
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1.88 |
2.02 |
30.2 |
-1.15 |
-0.31 |
14.3 |
86 |
4 |
3 |
3 |
3 |
1 |
1 |
0 |
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3 |
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2.98 |
3.19 |
33.6 |
-2.03 |
-0.71 |
24.3 |
87 |
1 |
6 |
1 |
2 |
0 |
1 |
0 |
CA 701 D
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4 |
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1.86 |
2.39 |
35.1 |
-1.26 |
-0.40 |
11.6 |
90 |
4 |
3 |
6 |
3 |
1 |
1 |
0 |
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5 |
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1.51 |
1.69 |
41.2 |
-1.43 |
-0.39 |
12.8 |
89 |
4 |
2 |
6 |
3 |
2 |
1 |
0 |
EDO 705 A
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6 |
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1.25 |
1.24 |
43.1 |
-1.35 |
-0.48 |
11.9 |
86 |
4 |
4 |
7 |
4 |
1 |
1 |
0 |
EDO 705 A
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7 |
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1.48 |
2.19 |
45.8 |
-1.31 |
-0.35 |
14.6 |
86 |
4 |
3 |
6 |
6 |
1 |
2 |
0 |
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8 |
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3.01 |
4.95 |
49.7 |
-3.16 |
-0.70 |
24.0 |
90 |
9 |
5 |
10 |
0 |
1 |
0 |
0 |
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9 |
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2.26 |
3.52 |
57.2 |
-1.62 |
-0.29 |
19.8 |
87 |
7 |
7 |
10 |
3 |
4 |
0 |
0 |
EDO 708 A EDO 710 A EDO 707 B
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10 |
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2.27 |
2.30 |
57.0 |
-1.74 |
-0.65 |
25.6 |
78 |
3 |
8 |
2 |
1 |
1 |
1 |
0 |
CA 704 B EDO 708 B
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11 |
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2.33 |
2.57 |
60.0 |
-1.84 |
-0.62 |
21.3 |
83 |
4 |
8 |
3 |
1 |
1 |
1 |
0 |
EDO 704 A
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12 |
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2.21 |
3.51 |
62.7 |
-1.80 |
-0.32 |
18.6 |
90 |
6 |
5 |
13 |
3 |
4 |
0 |
0 |
EDO 705 A EDO 706 A EDO 709 B EDO 711 B
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13 |
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1.94 |
2.60 |
70.3 |
-2.59 |
-0.61 |
24.4 |
91 |
6 |
6 |
10 |
2 |
0 |
2 |
0 |
EDO 704 A
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14 |
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1.27 |
1.55 |
72.0 |
-1.82 |
-0.44 |
20.4 |
86 |
9 |
8 |
9 |
2 |
3 |
1 |
0 |
EDO 708 A EDO 710 A EDO 707 B
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15 |
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2.27 |
3.19 |
74.0 |
-2.21 |
-0.50 |
17.8 |
90 |
8 |
8 |
14 |
1 |
3 |
0 |
0 |
EDO 711 C EDO 712 C
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16 |
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1.51 |
1.69 |
79.7 |
-1.96 |
-0.44 |
19.2 |
88 |
7 |
5 |
11 |
2 |
4 |
1 |
0 |
EDO 705 A EDO 706 A EDO 709 B EDO 711 B
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17 |
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1.25 |
1.29 |
81.6 |
-1.86 |
-0.48 |
18.0 |
87 |
8 |
7 |
12 |
3 |
3 |
1 |
0 |
EDO 705 A EDO 706 A EDO 709 B EDO 711 B
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18 |
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1.28 |
1.54 |
82.0 |
-1.90 |
-0.48 |
17.6 |
88 |
9 |
5 |
11 |
2 |
3 |
1 |
0 |
EDO 708 A EDO 710 A EDO 707 B
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19 |
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1.71 |
2.29 |
82.2 |
-1.79 |
-0.46 |
19.0 |
86 |
9 |
8 |
12 |
5 |
3 |
2 |
0 |
EDO 708 A EDO 710 A EDO 707 B
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20 |
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2.14 |
3.16 |
81.3 |
-1.61 |
-0.37 |
18.4 |
88 |
6 |
5 |
10 |
3 |
3 |
1 |
0 |
EDO 711 C EDO 712 C
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21 |
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1.52 |
1.69 |
86.5 |
-1.76 |
-0.42 |
17.4 |
85 |
10 |
9 |
11 |
2 |
5 |
1 |
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EDO 705 A EDO 706 A EDO 709 B EDO 711 B
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22 |
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1.23 |
1.24 |
88.4 |
-1.71 |
-0.47 |
16.8 |
84 |
10 |
11 |
12 |
3 |
4 |
1 |
0 |
EDO 705 A EDO 706 A EDO 709 B EDO 711 B
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23 |
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1.92 |
2.25 |
98.7 |
-1.98 |
-0.50 |
15.5 |
87 |
10 |
10 |
15 |
2 |
5 |
1 |
0 |
EDO 706 C EDO 708 C EDO 706 D
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24 |
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1.92 |
2.23 |
109.8 |
-1.57 |
-0.43 |
15.4 |
87 |
9 |
7 |
12 |
4 |
4 |
2 |
0 |
EDO 706 C EDO 708 C EDO 706 D
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25 |
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1.50 |
2.01 |
116.4 |
-1.59 |
-0.40 |
14.6 |
87 |
8 |
8 |
18 |
6 |
6 |
2 |
0 |
EDO 708 A EDO 710 A EDO 707 B EDO 711 C EDO 712 C
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26 |
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1.93 |
2.56 |
113.5 |
-1.75 |
-0.44 |
17.2 |
86 |
9 |
10 |
15 |
4 |
5 |
3 |
0 |
EDO 704 A EDO 706 C EDO 708 C EDO 706 D
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27 |
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1.48 |
2.10 |
141.2 |
-1.56 |
-0.41 |
13.6 |
86 |
10 |
10 |
19 |
7 |
7 |
3 |
0 |
EDO 708 A EDO 707 B EDO 706 C EDO 708 C EDO 706 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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