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PDBsum entry 6plt

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Pore analysis for: 6plt calculated with MOLE 2.0 PDB id
6plt
Pores calculated on whole structure Pores calculated excluding ligands

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15 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.30 48.4 -0.31 -0.29 7.3 82 2 1 3 7 1 3 0  
2 1.24 1.28 66.1 -0.53 -0.25 8.3 81 4 2 5 10 2 3 0  UNL 503 E
3 2.00 2.00 69.5 -2.53 -0.73 33.9 78 2 13 1 0 4 1 0  
4 1.36 1.70 74.5 -1.12 -0.37 16.0 91 7 2 4 11 1 1 0  
5 1.26 1.29 76.7 -0.65 -0.29 10.6 84 5 3 7 11 1 3 0  
6 1.42 1.69 78.6 -0.64 -0.14 14.3 83 8 2 6 17 2 2 0  UNL 503 B
7 1.31 1.65 79.1 -0.67 -0.12 15.2 83 8 2 6 17 2 2 0  UNL 503 E
8 1.23 1.29 85.1 -0.43 -0.35 7.6 88 6 1 6 10 0 4 0  
9 1.50 4.97 91.5 0.05 -0.22 7.0 89 7 1 5 12 0 5 0  
10 1.24 1.29 95.1 -0.68 -0.31 10.7 87 6 2 7 13 1 3 0  
11 1.32 1.67 99.6 0.24 -0.13 5.5 86 6 1 8 17 1 6 0  UNL 503 E
12 1.42 1.91 101.0 0.19 -0.13 6.4 86 6 1 8 17 1 6 0  UNL 503 B
13 1.29 1.17 117.5 0.48 -0.07 6.5 87 7 1 8 23 2 1 0  UNL 505 A
14 1.99 2.00 99.4 -2.15 -0.62 25.4 83 5 14 6 1 4 2 0  
15 1.25 1.27 108.7 -0.03 -0.22 7.1 87 7 2 9 14 0 7 0  
16 1.22 1.26 117.8 0.47 -0.14 5.7 88 6 1 7 21 1 2 0  UNL 505 A
17 1.26 1.35 117.8 0.45 -0.09 6.6 87 6 1 8 23 2 1 0  UNL 510 C
18 1.24 1.28 118.0 0.45 -0.16 5.5 88 6 1 7 21 1 2 0  UNL 510 C
19 1.33 1.62 134.7 -1.44 -0.43 19.0 85 7 11 6 11 3 2 0  UNL 510 A
20 1.33 1.63 134.6 -1.50 -0.43 19.6 85 7 11 6 11 3 2 0  UNL 503 B
21 1.39 1.66 141.9 -1.48 -0.44 19.3 86 8 11 6 12 3 2 0  UNL 503 E
22 1.22 1.25 155.1 -0.36 -0.30 8.8 87 11 3 10 15 0 7 0  
23 1.34 1.68 154.9 -0.40 -0.21 10.4 86 11 3 11 17 1 6 0  
24 1.45 1.56 153.8 -1.70 -0.51 20.7 87 8 14 12 10 3 2 0  
25 1.31 1.52 155.9 -1.54 -0.47 18.3 87 8 10 11 10 4 2 0  
26 1.16 1.04 183.2 -0.26 -0.25 12.0 88 9 10 8 20 3 2 0  UNL 510 C
27 1.51 5.02 185.9 -0.80 -0.38 13.9 88 9 13 13 13 2 6 0  
28 1.32 5.05 188.0 -0.66 -0.34 12.4 88 10 9 13 13 3 6 0  
29 1.15 1.04 183.0 -0.29 -0.27 11.9 88 9 10 9 20 3 2 0  UNL 505 A
30 1.35 4.99 220.4 -0.80 -0.34 13.6 88 14 12 12 14 2 6 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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