spacer
spacer

PDBsum entry 6phh

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6phh calculated with MOLE 2.0 PDB id
6phh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 2.71 29.2 -2.16 -0.67 25.4 89 1 3 2 0 0 2 0  
2 1.89 1.93 30.7 -1.60 -0.38 11.5 80 2 1 2 2 1 2 0  
3 1.35 1.65 40.6 -1.54 -0.68 14.6 99 1 3 6 0 1 0 0  
4 3.72 3.73 50.1 -0.87 -0.44 5.3 80 1 1 4 2 2 4 0  
5 1.41 1.57 63.4 -1.17 -0.53 8.9 85 3 0 7 3 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer