PDBsum entry 6pd4 Go to PDB code:  Pore analysis for: 6pd4 calculated with MOLE 2.0 PDB id 6pd4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.92 1.93 68.0 -2.18 -0.70 18.5 83 8 3 9 2 0 2 0  SO4 715 A 2 1.60 2.06 112.0 -1.65 -0.46 17.5 83 7 5 8 3 2 2 0  SO4 715 A SO4 714 B NAG 2 F 3 1.59 2.13 118.3 -1.48 -0.56 14.8 83 7 7 11 5 2 2 0  SO4 714 B NAG 2 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.