spacer
spacer

PDBsum entry 6pas

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) links
Signaling protein PDB id
6pas
Contents
Protein chains
559 a.a.
576 a.a.
Ligands
HEM
procheck   Generate full PROCHECK analyses

PROCHECK summary for 6pas

Ramachandran plot

PROCHECK statistics

1. Ramachandran Plot statistics


                                         No. of
                                        residues     %-tage
                                         ------      ------
Most favoured regions      [A,B,L]          720       71.1%** 
Additional allowed regions [a,b,l,p]        281       27.7%          
Generously allowed regions [~a,~b,~l,~p]     11        1.1%          
Disallowed regions         [XX]               1        0.1%*  
                                           ----      ------
Non-glycine and non-proline residues       1013      100.0%

End-residues (excl. Gly and Pro)             10

Glycine residues                             65
Proline residues                             47
                                           ----
Total number of residues                   1135


Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good quality model would be expected to have over 90% in the most favoured regions [A,B,L].


2. G-Factors

                                                Average
Parameter                            Score       Score
---------                            -----       -----
Dihedral angles:-
     Phi-psi distribution            -0.72*     
     Chi1-chi2 distribution           0.00      
     Chi1 only                        0.00      
     Chi3 & chi4                      0.00      
     Omega                            0.34      
                                                  -0.19      
                                                  =====
Main-chain covalent forces:-
     Main-chain bond lengths          0.61      
     Main-chain bond angles           0.39      
                                                   0.49      
                                                  =====

     OVERALL AVERAGE                               0.16      
                                                  =====

G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.

Values below -0.5*  - unusual
Values below -1.0** - highly unusual
Important note: The main-chain bond-lengths and bond angles are compared with the Engh & Huber (1991) ideal values derived from small-molecule data. Therefore, structures refined using different restraints may show apparently large deviations from normality.

 

spacer

spacer