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PDBsum entry 6p2c

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Immune system PDB id
6p2c
Contents
Protein chains
275 a.a.
99 a.a.
Ligands
ALA-ALA-ALA-LYS-
LYS-LYS-TYR-CYS-
LEU
Waters ×311

References listed in PDB file
Key reference
Title Erap1 enzyme-Mediated trimming and structural analyses of mhc i-Bound precursor peptides yield novel insights into antigen processing and presentation.
Authors L.Li, M.Batliwala, M.Bouvier.
Ref. J Biol Chem, 2019, 294, 18534-18544. [DOI no: 10.1074/jbc.RA119.010102]
PubMed id 31601650
Abstract
Endoplasmic reticulum aminopeptidase 1 (ERAP1) and ERAP2 critically shape the major histocompatibility complex I (MHC I) immunopeptidome. The ERAPs remove N-terminal residues from antigenic precursor peptides and generate optimal-length peptides (i.e. 8-10-mers) to fit into the MHC class I groove. It is therefore intriguing that MHC class I molecules can present N-terminally extended peptides on the cell surface that can elicit CD8+ T-cell responses. This observation likely reflects gaps in our understanding of how antigens are processed by the ERAP enzymes. To better understand ERAPs' function in antigen processing, here we generated a nested set of N-terminally extended 10-20-mer peptides (RA)
PROCHECK
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 Headers

 

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