 |
PDBsum entry 6obh
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 6obh calculated with MOLE 2.0
|
PDB id
|
|
|
|
6obh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
7 pores,
coloured by radius |
 |
10 pores,
coloured by radius
|
10 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.26 |
1.58 |
90.3 |
-1.28 |
-0.59 |
9.0 |
85 |
 |
3 |
4 |
11 |
3 |
1 |
2 |
2 |
 |
NA 301 F
|
 |
 |
2 |
 |
1.78 |
1.84 |
100.3 |
-1.22 |
-0.56 |
6.7 |
89 |
2 |
4 |
16 |
7 |
0 |
5 |
0 |
|
 |
3 |
 |
1.16 |
1.32 |
169.4 |
-1.26 |
-0.49 |
10.1 |
86 |
4 |
5 |
14 |
11 |
1 |
5 |
0 |
|
 |
4 |
 |
1.78 |
1.81 |
187.1 |
-1.61 |
-0.63 |
7.5 |
91 |
7 |
5 |
31 |
10 |
0 |
6 |
0 |
NA 301 F
|
 |
5 |
 |
1.27 |
1.58 |
184.6 |
-0.73 |
-0.45 |
11.8 |
82 |
4 |
8 |
7 |
8 |
1 |
4 |
2 |
|
 |
6 |
 |
1.25 |
1.60 |
209.3 |
-1.28 |
-0.49 |
17.6 |
84 |
4 |
8 |
9 |
11 |
1 |
2 |
2 |
NA 301 B
|
 |
7 |
 |
1.32 |
1.38 |
239.4 |
-1.44 |
-0.54 |
10.8 |
87 |
10 |
7 |
28 |
14 |
1 |
7 |
4 |
NA 301 B
|
 |
8 |
 |
1.25 |
1.39 |
238.2 |
-1.52 |
-0.60 |
7.3 |
90 |
4 |
6 |
32 |
13 |
1 |
6 |
0 |
|
 |
9 |
 |
1.66 |
1.93 |
242.0 |
-1.56 |
-0.60 |
8.1 |
90 |
6 |
5 |
27 |
11 |
0 |
7 |
0 |
|
 |
10 |
 |
1.20 |
1.55 |
362.5 |
-1.40 |
-0.55 |
9.2 |
87 |
9 |
10 |
38 |
19 |
2 |
8 |
4 |
NA 301 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |