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PDBsum entry 6nqs

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6nqs calculated with MOLE 2.0 PDB id
6nqs
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.52 26.2 -0.34 -0.01 10.5 84 2 1 1 4 1 0 0  
2 2.26 2.36 40.6 -0.83 -0.22 16.1 77 7 2 4 4 1 3 0  
3 2.25 2.36 46.8 -0.88 -0.29 13.5 83 5 2 7 5 1 2 0  
4 1.68 1.70 59.9 -1.76 -0.42 25.8 77 6 5 1 4 1 2 0  
5 2.31 2.71 62.8 -2.23 -0.48 37.1 81 9 11 1 3 0 1 0  
6 2.36 4.64 69.5 -1.92 -0.23 32.6 78 12 7 2 3 1 4 0  
7 2.25 2.36 75.0 -1.55 -0.34 26.8 82 10 6 3 7 1 1 0  
8 2.32 2.74 82.5 -2.71 -0.60 34.4 76 9 13 3 0 1 5 0  
9 2.26 2.35 85.3 -2.13 -0.64 27.9 80 8 11 4 4 1 2 0  
10 1.56 3.82 85.3 -1.81 -0.24 28.5 81 10 7 5 5 1 3 1  
11 2.12 4.01 107.4 -2.49 -0.53 38.5 78 13 13 1 3 0 2 0  
12 2.10 3.99 115.8 -2.17 -0.40 38.8 78 17 16 0 6 0 1 0  
13 1.45 1.81 123.5 -1.86 -0.32 28.8 82 14 7 3 5 0 3 0  
14 1.42 1.82 130.0 -2.44 -0.53 37.2 82 17 16 1 6 0 2 0  
15 2.28 4.25 134.6 -2.42 -0.46 36.5 75 17 16 2 3 1 5 0  
16 2.20 4.00 137.4 -2.10 -0.51 32.2 79 16 14 3 7 0 2 0  
17 1.52 1.52 150.2 -2.82 -0.66 36.8 83 14 15 4 3 0 3 0  
18 2.84 3.88 29.5 -2.38 -0.51 39.6 79 7 6 0 2 0 0 0  
19 1.03 1.50 46.1 -0.88 -0.53 15.4 85 2 4 2 3 1 0 0  
20 1.31 1.42 47.1 -1.91 -0.31 26.9 80 9 1 3 3 1 0 0  
21 1.03 1.50 73.7 -1.23 -0.35 22.9 82 10 7 2 5 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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