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PDBsum entry 6nq9

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6nq9 calculated with MOLE 2.0 PDB id
6nq9
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.96 6.16 29.8 2.63 1.00 0.7 86 0 0 2 12 2 1 0  
2 3.81 6.21 30.9 3.02 1.19 0.4 74 0 0 0 11 4 0 0  
3 2.32 2.68 31.3 0.85 0.46 1.8 70 0 0 2 5 3 0 0  
4 2.16 2.75 43.1 3.39 1.04 0.4 87 0 0 0 20 1 0 0  
5 3.58 4.31 46.3 2.24 0.78 0.8 88 0 0 3 20 2 1 0  
6 2.50 4.01 47.3 1.80 0.85 1.3 84 1 0 2 18 4 1 0  
7 2.07 2.67 65.7 2.63 0.94 0.9 82 0 0 1 18 2 0 0  
8 1.89 2.70 93.4 2.30 1.00 3.5 77 2 0 0 22 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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