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PDBsum entry 6n4f

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6n4f calculated with MOLE 2.0 PDB id
6n4f
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.44 2.66 50.0 -2.12 -0.81 20.2 93 3 5 6 1 0 1 0  
2 1.95 2.09 51.2 -1.97 -0.58 23.2 77 7 5 3 0 2 0 0  
3 1.96 2.12 51.4 -1.95 -0.59 22.6 77 7 5 3 0 2 0 0  
4 1.94 2.11 51.3 -2.03 -0.61 23.3 77 7 5 3 0 2 0 0  
5 1.67 1.69 62.0 0.43 0.25 9.9 88 3 4 7 9 2 3 0  
6 1.97 2.15 63.5 -1.91 -0.31 29.2 76 6 7 3 0 4 0 0  
7 1.98 2.13 63.7 -1.83 -0.30 29.0 77 8 7 3 0 4 0 0  
8 1.95 2.09 64.6 -1.92 -0.34 29.1 77 8 7 3 0 4 0 0  
9 1.22 1.22 66.8 -0.44 -0.19 17.1 79 4 4 3 8 0 1 0  
10 1.69 1.79 86.7 -2.17 -0.55 25.8 83 9 9 7 2 2 2 0  
11 2.45 2.66 87.8 -0.45 -0.10 11.8 88 4 7 9 7 3 5 0  
12 1.70 1.70 100.0 -1.78 -0.47 20.0 83 7 12 10 4 4 5 0  
13 2.49 3.65 105.4 -0.64 -0.21 13.6 90 3 8 12 6 4 3 0  
14 1.71 1.71 106.7 -0.24 0.09 14.4 84 8 9 10 9 5 3 0  
15 1.70 1.69 117.3 -1.81 -0.53 20.8 85 6 13 12 3 4 3 0  
16 1.63 1.63 121.1 -1.51 -0.29 21.3 80 11 14 11 6 6 3 0  
17 1.23 2.17 188.6 -1.10 -0.34 19.1 81 10 17 15 16 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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